Make Chord Diagram — plot

Makes a chord diagram representing the frequency of interactions between features

Usage

plot_chord(
  fit,
  featureNames,
  featureGroups,
  linkColors,
  gridColors,
  bgLinkColor = "gray",
  maxLen,
  lengths = c(1:maxLen),
  dims = c(1, maxLen),
  minProp = 0,
  textSize = 1,
  line_arg = 1,
  side_mar = 0,
  top_mar = 0
)

Arguments

fit: output from function BRS
featureNames: names of features as they appeared in df
featureGroups: dataframe whose first column is the features (only the prefixes, not the values) in featureNames and whose second column is the corresponding labels to display
linkColors: vector of colors to use for chords
gridColors: vector of colors to use for arcs
minProp: minimum proportion of times a relationship must appear to be plotted
textSize: cex parameter to be passed to par

Value

chord diagram